Living Systems_

Xml

Parsing DrugBank XML (or any large XML file) in streaming mode in Go

I had a problem in which I thought I needed to parse the full DrugBank dataset, which comes as a (670MB) XML file (For open access papers describing DrugBank, see: [1], [2], [3] and [4]). It turned out what I needed was available as CSV files under “Structure External Links ”. There is probably still some …